Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 AC074386.1-202ENST00000463561 864 ntBASIC19.5■□□□□ 0.71
COL20A1Q9P218 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 AL031432.2-201ENST00000566714 459 ntBASIC19.5■□□□□ 0.71
COL20A1Q9P218 AL928711.1-201ENST00000570165 459 ntBASIC19.5■□□□□ 0.71
COL20A1Q9P218 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 AP006288.1-201ENST00000446065 395 ntBASIC19.49■□□□□ 0.71
COL20A1Q9P218 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL20A1Q9P218 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL20A1Q9P218 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL20A1Q9P218 GNAS-203ENST00000306120 1878 ntBASIC19.48■□□□□ 0.71
COL20A1Q9P218 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL20A1Q9P218 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL20A1Q9P218 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL20A1Q9P218 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.48■□□□□ 0.71
COL20A1Q9P218 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.48■□□□□ 0.71
COL20A1Q9P218 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.48■□□□□ 0.71
COL20A1Q9P218 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.48■□□□□ 0.71
COL20A1Q9P218 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.48■□□□□ 0.71
COL20A1Q9P218 AC007064.4-201ENST00000637740 555 ntBASIC19.48■□□□□ 0.71
COL20A1Q9P218 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL20A1Q9P218 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
COL20A1Q9P218 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL20A1Q9P218 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL20A1Q9P218 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 ELL2P1-201ENST00000413990 1906 ntBASIC19.47■□□□□ 0.71
COL20A1Q9P218 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 MKNK2P1-201ENST00000437526 628 ntBASIC19.47■□□□□ 0.71
COL20A1Q9P218 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 REXO1L3P-201ENST00000622202 1288 ntBASIC19.47■□□□□ 0.71
COL20A1Q9P218 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL20A1Q9P218 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL20A1Q9P218 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL20A1Q9P218 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL20A1Q9P218 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL20A1Q9P218 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms