Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC046185.3-201ENST00000623228 1824 ntBASIC15.96■□□□□ 0.14
SDHAF3Q9NRP4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SDHAF3Q9NRP4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SDHAF3Q9NRP4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.96■□□□□ 0.14
SDHAF3Q9NRP4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 PRYP5-201ENST00000451909 266 ntBASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 EMBP1-201ENST00000458200 901 ntBASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 AC073592.4-201ENST00000623827 446 ntBASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SDHAF3Q9NRP4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AC016396.2-201ENST00000562575 1417 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 LYSMD4-203ENST00000378904 2122 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AKR1C7P-201ENST00000305623 895 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 FGFR3P6-201ENST00000457012 610 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AF238378.1-201ENST00000526806 358 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AL121912.1-201ENST00000603683 238 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AC064862.7-201ENST00000604520 867 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AL022326.1-202ENST00000641533 845 ntBASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SDHAF3Q9NRP4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SDHAF3Q9NRP4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SDHAF3Q9NRP4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.93■□□□□ 0.14
SDHAF3Q9NRP4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SDHAF3Q9NRP4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.93■□□□□ 0.14
SDHAF3Q9NRP4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SDHAF3Q9NRP4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SDHAF3Q9NRP4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms