Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 MIR4469-201ENST00000583919 79 ntBASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 AC080080.1-201ENST00000625121 2420 ntBASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE5Q9HCH3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 ALG1L5P-201ENST00000482043 771 ntBASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC106028.4-201ENST00000614509 607 ntBASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC018695.7-201ENST00000624587 2492 ntBASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE5Q9HCH3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AC097374.2-201ENST00000618617 1306 ntBASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AL645608.8-201ENST00000606034 2086 ntBASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AL035633.1-201ENST00000406139 838 ntBASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 LAGE3P1-201ENST00000425356 484 ntBASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AL645939.2-201ENST00000427340 991 ntBASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AC244107.1-201ENST00000442033 332 ntBASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 AC009154.2-201ENST00000621177 724 ntBASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE5Q9HCH3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms