Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AP003041.3-201ENST00000527151 707 ntBASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AC008687.5-201ENST00000593746 558 ntBASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AC005915.1-201ENST00000624912 2018 ntBASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ID1-201ENST00000376105 1233 ntBASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 TSPY17P-201ENST00000450329 467 ntBASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 AL161772.1-201ENST00000610494 4412 ntBASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SND1-IT1Q9HBX3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms