Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ST20-AS1-201ENST00000560255 4223 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC103702.1-201ENST00000548801 2630 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CYP51A1P1-201ENST00000492267 1507 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC097658.1-201ENST00000475555 843 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC090142.2-201ENST00000483263 416 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC091874.3-201ENST00000512672 1195 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms