Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
CCL13Q99616 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CCL13Q99616 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL13Q99616 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCL13Q99616 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCL13Q99616 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 TPM4P1-201ENST00000436100 807 ntBASIC14.55□□□□□ -0.08
CCL13Q99616 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCL13Q99616 SCARNA2-201ENST00000458748 420 ntBASIC14.55□□□□□ -0.08
CCL13Q99616 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 SART3-203ENST00000546611 1184 ntBASIC14.55□□□□□ -0.08
CCL13Q99616 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.55□□□□□ -0.08
CCL13Q99616 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL13Q99616 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL13Q99616 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 AC026471.1-201ENST00000564629 3026 ntBASIC14.55□□□□□ -0.08
CCL13Q99616 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL13Q99616 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CCL13Q99616 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL13Q99616 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 AC079781.3-201ENST00000449110 356 ntBASIC14.54□□□□□ -0.08
CCL13Q99616 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.54□□□□□ -0.08
CCL13Q99616 AL121894.2-201ENST00000602977 491 ntBASIC14.54□□□□□ -0.08
CCL13Q99616 AL121912.1-201ENST00000603683 238 ntBASIC14.54□□□□□ -0.08
CCL13Q99616 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 AL139288.1-201ENST00000623748 933 ntBASIC14.54□□□□□ -0.08
CCL13Q99616 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 AC141586.5-201ENST00000624546 2050 ntBASIC14.54□□□□□ -0.08
CCL13Q99616 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL13Q99616 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 CROCCP2-202ENST00000412962 2773 ntBASIC14.54□□□□□ -0.08
CCL13Q99616 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CCL13Q99616 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL13Q99616 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CCL13Q99616 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCL13Q99616 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms