Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 TERC-201ENST00000602385 541 ntBASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDK5RAP1Q96SZ6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 FZD10-202ENST00000539839 3282 ntBASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 AC108073.2-201ENST00000464002 357 ntBASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDK5RAP1Q96SZ6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 MRPL20P1-201ENST00000400819 433 ntBASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 RNA5SP416-201ENST00000516838 111 ntBASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 AL671883.3-201ENST00000603274 991 ntBASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 AC010654.1-201ENST00000615722 808 ntBASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP1Q96SZ6 PMS2P7-201ENST00000506558 1336 ntBASIC17.96■□□□□ 0.46
CDK5RAP1Q96SZ6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDK5RAP1Q96SZ6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 CRYGEP-201ENST00000412192 528 ntBASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms