Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AP002472.1-201ENST00000577490 586 ntBASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 AC005412.3-201ENST00000580309 715 ntBASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 AL513210.1-201ENST00000629608 234 ntBASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 AL121761.2-201ENST00000598007 1648 ntBASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 AC067852.2-201ENST00000590513 2313 ntBASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 PP12613-201ENST00000424958 2230 ntBASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP2Q96SN8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 RNU1-129P-201ENST00000384064 167 ntBASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 RFPL4AP1-201ENST00000530883 850 ntBASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AC093520.2-201ENST00000561830 333 ntBASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 U1.21-201ENST00000580816 167 ntBASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AL355385.1-201ENST00000606123 409 ntBASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 HMGA1P7-201ENST00000406908 502 ntBASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AL355306.1-201ENST00000415580 579 ntBASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.18■□□□□ 0.82
CDK5RAP2Q96SN8 AC131009.4-201ENST00000624048 1740 ntBASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 ACTG1P14-201ENST00000446382 1122 ntBASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 AL353732.1-201ENST00000569618 1459 ntBASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms