Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 AL596257.1-201ENST00000641463 2694 ntBASIC15.13■□□□□ 0.01
CPNE2Q96FN4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 HOMER2P1-201ENST00000455653 964 ntBASIC15.13■□□□□ 0.01
CPNE2Q96FN4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE2Q96FN4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 AL353692.3-201ENST00000407031 1396 ntBASIC15.12■□□□□ 0.01
CPNE2Q96FN4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 AC087499.1-201ENST00000418141 1075 ntBASIC15.12■□□□□ 0.01
CPNE2Q96FN4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.12■□□□□ 0.01
CPNE2Q96FN4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE2Q96FN4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 AL137013.1-201ENST00000432946 1228 ntBASIC15.11■□□□□ 0.01
CPNE2Q96FN4 MTCL1P1-201ENST00000446207 792 ntBASIC15.11■□□□□ 0.01
CPNE2Q96FN4 AL359075.1-203ENST00000462729 1002 ntBASIC15.11■□□□□ 0.01
CPNE2Q96FN4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE2Q96FN4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms