Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 PI4KAP1-204ENST00000612579 1703 ntBASIC18.78■□□□□ 0.6
PGBD4Q96DM1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 AC004967.1-201ENST00000453589 447 ntBASIC18.78■□□□□ 0.6
PGBD4Q96DM1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 AL139327.4-201ENST00000612362 153 ntBASIC18.78■□□□□ 0.6
PGBD4Q96DM1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 AL590787.1-201ENST00000568856 1315 ntBASIC18.77■□□□□ 0.6
PGBD4Q96DM1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 AC018845.2-201ENST00000568326 409 ntBASIC18.77■□□□□ 0.6
PGBD4Q96DM1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.77■□□□□ 0.6
PGBD4Q96DM1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
PGBD4Q96DM1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.77■□□□□ 0.59
PGBD4Q96DM1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PGBD4Q96DM1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PGBD4Q96DM1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 AL135999.2-201ENST00000622438 1686 ntBASIC18.76■□□□□ 0.59
PGBD4Q96DM1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 AC096734.2-201ENST00000562054 433 ntBASIC18.76■□□□□ 0.59
PGBD4Q96DM1 AC005829.1-201ENST00000570002 483 ntBASIC18.76■□□□□ 0.59
PGBD4Q96DM1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PGBD4Q96DM1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 RPS8P6-201ENST00000426177 609 ntBASIC18.75■□□□□ 0.59
PGBD4Q96DM1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms