Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 AC026691.1-201ENST00000602502 2017 ntBASIC16.53■□□□□ 0.24
LRRC58Q96CX6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 MYCLP1-201ENST00000372451 1075 ntBASIC16.53■□□□□ 0.24
LRRC58Q96CX6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 HLA-F-220ENST00000434407 884 ntBASIC16.53■□□□□ 0.24
LRRC58Q96CX6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.53■□□□□ 0.24
LRRC58Q96CX6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC58Q96CX6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 AC079328.2-201ENST00000561241 3354 ntBASIC16.52■□□□□ 0.24
LRRC58Q96CX6 AC008741.2-201ENST00000612792 3115 ntBASIC16.52■□□□□ 0.24
LRRC58Q96CX6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 AC010460.3-201ENST00000511359 1579 ntBASIC16.52■□□□□ 0.24
LRRC58Q96CX6 AC097374.2-201ENST00000618617 1306 ntBASIC16.52■□□□□ 0.24
LRRC58Q96CX6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 IGHGP-201ENST00000390555 1178 ntBASIC16.52■□□□□ 0.24
LRRC58Q96CX6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC58Q96CX6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
LRRC58Q96CX6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC58Q96CX6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms