Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 AP000867.4-201ENST00000641616 219 ntBASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 TNRC18P3-201ENST00000441896 2691 ntBASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 AC011676.5-201ENST00000624864 2660 ntBASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDF1Q96CC6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RHBDF1Q96CC6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RHBDF1Q96CC6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.89■□□□□ 0.3
RHBDF1Q96CC6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RHBDF1Q96CC6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 MIR5100-201ENST00000579544 119 ntBASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDF1Q96CC6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDF1Q96CC6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDF1Q96CC6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms