Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 COX5BP8-201ENST00000416911 349 ntBASIC17.17■□□□□ 0.34
CLDN23Q96B33 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 REXO1L11P-201ENST00000620964 1927 ntBASIC17.16■□□□□ 0.34
CLDN23Q96B33 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.16■□□□□ 0.34
CLDN23Q96B33 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN23Q96B33 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN23Q96B33 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 MIR4453-201ENST00000584019 89 ntBASIC17.15■□□□□ 0.34
CLDN23Q96B33 AC027307.2-201ENST00000591252 911 ntBASIC17.15■□□□□ 0.34
CLDN23Q96B33 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 AL590560.3-201ENST00000623350 461 ntBASIC17.15■□□□□ 0.34
CLDN23Q96B33 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN23Q96B33 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN23Q96B33 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 TSSK5P-201ENST00000423978 907 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms