Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 LINC02012-201ENST00000608206 1725 ntBASIC16.71■□□□□ 0.27
VPS33AQ96AX1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 SLC25A1P3-201ENST00000395415 828 ntBASIC16.71■□□□□ 0.27
VPS33AQ96AX1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 AL596275.1-201ENST00000423464 877 ntBASIC16.71■□□□□ 0.27
VPS33AQ96AX1 MTCL1P1-201ENST00000446207 792 ntBASIC16.71■□□□□ 0.27
VPS33AQ96AX1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS33AQ96AX1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VPS33AQ96AX1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VPS33AQ96AX1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VPS33AQ96AX1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
VPS33AQ96AX1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.71■□□□□ 0.26
VPS33AQ96AX1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 IGHGP-201ENST00000390555 1178 ntBASIC16.7■□□□□ 0.26
VPS33AQ96AX1 SLC25A3P1-201ENST00000443844 931 ntBASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AC068472.1-201ENST00000474589 881 ntBASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AC092597.1-201ENST00000487352 616 ntBASIC16.7■□□□□ 0.26
VPS33AQ96AX1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AC145285.6-201ENST00000604632 637 ntBASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 RNF216P1-203ENST00000404404 2427 ntBASIC16.7■□□□□ 0.26
VPS33AQ96AX1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AC093525.9-201ENST00000624961 1746 ntBASIC16.7■□□□□ 0.26
VPS33AQ96AX1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS33AQ96AX1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 AL353692.3-201ENST00000407031 1396 ntBASIC16.69■□□□□ 0.26
VPS33AQ96AX1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms