Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2E3Q969T4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2E3Q969T4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2E3Q969T4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2E3Q969T4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 AL121772.3-201ENST00000610840 674 ntBASIC16.69■□□□□ 0.26
UBE2E3Q969T4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.69■□□□□ 0.26
UBE2E3Q969T4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 AP001094.4-201ENST00000579008 2176 ntBASIC16.68■□□□□ 0.26
UBE2E3Q969T4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 AL135999.2-201ENST00000622438 1686 ntBASIC16.68■□□□□ 0.26
UBE2E3Q969T4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBE2E3Q969T4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 LTB4R2-202ENST00000528054 3092 ntBASIC16.67■□□□□ 0.26
UBE2E3Q969T4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 SPDYE21P-201ENST00000413323 827 ntBASIC16.67■□□□□ 0.26
UBE2E3Q969T4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.67■□□□□ 0.26
UBE2E3Q969T4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UBE2E3Q969T4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms