Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 HCG4B-203ENST00000450128 991 ntBASIC22.6■■□□□ 1.21
RTF1Q92541 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.6■■□□□ 1.21
RTF1Q92541 AC002347.1-201ENST00000569543 541 ntBASIC22.6■■□□□ 1.21
RTF1Q92541 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.6■■□□□ 1.21
RTF1Q92541 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RTF1Q92541 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.6■■□□□ 1.21
RTF1Q92541 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.6■■□□□ 1.21
RTF1Q92541 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RTF1Q92541 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.59■■□□□ 1.21
RTF1Q92541 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.59■■□□□ 1.21
RTF1Q92541 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC22.59■■□□□ 1.21
RTF1Q92541 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTF1Q92541 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTF1Q92541 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTF1Q92541 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.59■■□□□ 1.21
RTF1Q92541 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
RTF1Q92541 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.59■■□□□ 1.21
RTF1Q92541 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTF1Q92541 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTF1Q92541 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.59■■□□□ 1.21
RTF1Q92541 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTF1Q92541 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTF1Q92541 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC22.59■■□□□ 1.21
RTF1Q92541 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTF1Q92541 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTF1Q92541 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTF1Q92541 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTF1Q92541 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RTF1Q92541 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.58■■□□□ 1.21
RTF1Q92541 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.58■■□□□ 1.21
RTF1Q92541 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.58■■□□□ 1.21
RTF1Q92541 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.58■■□□□ 1.21
RTF1Q92541 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.58■■□□□ 1.21
RTF1Q92541 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.58■■□□□ 1.21
RTF1Q92541 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.58■■□□□ 1.21
RTF1Q92541 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTF1Q92541 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RTF1Q92541 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RTF1Q92541 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RTF1Q92541 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
RTF1Q92541 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RTF1Q92541 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTF1Q92541 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTF1Q92541 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.57■■□□□ 1.2
RTF1Q92541 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.57■■□□□ 1.2
RTF1Q92541 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.57■■□□□ 1.2
RTF1Q92541 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RTF1Q92541 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 YBX2P1-201ENST00000394192 760 ntBASIC22.57■■□□□ 1.2
RTF1Q92541 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.57■■□□□ 1.2
RTF1Q92541 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 AC004832.2-201ENST00000426397 482 ntBASIC22.57■■□□□ 1.2
RTF1Q92541 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.57■■□□□ 1.2
RTF1Q92541 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.57■■□□□ 1.2
RTF1Q92541 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.57■■□□□ 1.2
RTF1Q92541 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.57■■□□□ 1.2
RTF1Q92541 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.57■■□□□ 1.2
RTF1Q92541 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.57■■□□□ 1.2
RTF1Q92541 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.57■■□□□ 1.2
RTF1Q92541 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.57■■□□□ 1.2
RTF1Q92541 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTF1Q92541 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
RTF1Q92541 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RTF1Q92541 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.56■■□□□ 1.2
RTF1Q92541 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.56■■□□□ 1.2
RTF1Q92541 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.56■■□□□ 1.2
RTF1Q92541 DNAJB3-201ENST00000446806 729 ntBASIC22.56■■□□□ 1.2
RTF1Q92541 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC22.56■■□□□ 1.2
RTF1Q92541 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.56■■□□□ 1.2
RTF1Q92541 AC018845.2-201ENST00000568326 409 ntBASIC22.56■■□□□ 1.2
RTF1Q92541 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RTF1Q92541 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTF1Q92541 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.55■■□□□ 1.2
RTF1Q92541 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTF1Q92541 AC134043.2-201ENST00000624206 2238 ntBASIC22.55■■□□□ 1.2
RTF1Q92541 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms