Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 AC098831.1-202ENST00000438821 336 ntBASIC20.39■□□□□ 0.85
STAG1Q8WVM7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
STAG1Q8WVM7 AL023806.1-201ENST00000603994 1649 ntBASIC20.38■□□□□ 0.85
STAG1Q8WVM7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 AL645608.8-201ENST00000606034 2086 ntBASIC20.38■□□□□ 0.85
STAG1Q8WVM7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 PTCHD3P3-201ENST00000403073 906 ntBASIC20.38■□□□□ 0.85
STAG1Q8WVM7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 AC145285.3-201ENST00000564603 959 ntBASIC20.38■□□□□ 0.85
STAG1Q8WVM7 MIR1199-201ENST00000621445 119 ntBASIC20.38■□□□□ 0.85
STAG1Q8WVM7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.38■□□□□ 0.85
STAG1Q8WVM7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 ZNF259P1-201ENST00000407656 1365 ntBASIC20.37■□□□□ 0.85
STAG1Q8WVM7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 RPS15P9-201ENST00000494093 319 ntBASIC20.37■□□□□ 0.85
STAG1Q8WVM7 KRT18P58-201ENST00000527480 1120 ntBASIC20.37■□□□□ 0.85
STAG1Q8WVM7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
STAG1Q8WVM7 LTB4R2-202ENST00000528054 3092 ntBASIC20.37■□□□□ 0.85
STAG1Q8WVM7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 AP002414.1-201ENST00000391405 1147 ntBASIC20.36■□□□□ 0.85
STAG1Q8WVM7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 TERC-201ENST00000602385 541 ntBASIC20.36■□□□□ 0.85
STAG1Q8WVM7 PGM5P2-202ENST00000637225 1043 ntBASIC20.36■□□□□ 0.85
STAG1Q8WVM7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
STAG1Q8WVM7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.35■□□□□ 0.85
STAG1Q8WVM7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
STAG1Q8WVM7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.35■□□□□ 0.85
STAG1Q8WVM7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.35■□□□□ 0.85
STAG1Q8WVM7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.35■□□□□ 0.85
STAG1Q8WVM7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms