Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 KRT8P26-201ENST00000534154 1276 ntBASIC17.16■□□□□ 0.34
SNX31Q8N9S9 AC090616.6-201ENST00000582640 721 ntBASIC17.16■□□□□ 0.34
SNX31Q8N9S9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 AC018695.7-201ENST00000624587 2492 ntBASIC17.16■□□□□ 0.34
SNX31Q8N9S9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 AC106886.4-201ENST00000623557 2502 ntBASIC17.16■□□□□ 0.34
SNX31Q8N9S9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX31Q8N9S9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 BX276092.5-203ENST00000456199 560 ntBASIC17.15■□□□□ 0.34
SNX31Q8N9S9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 AC011840.4-201ENST00000578471 627 ntBASIC17.15■□□□□ 0.34
SNX31Q8N9S9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 AC005332.1-201ENST00000577698 1310 ntBASIC17.15■□□□□ 0.34
SNX31Q8N9S9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 AL139384.1-201ENST00000612143 3047 ntBASIC17.15■□□□□ 0.34
SNX31Q8N9S9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNX31Q8N9S9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 NFIC-211ENST00000641145 8399 ntBASIC17.14■□□□□ 0.33
SNX31Q8N9S9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 AC096633.1-201ENST00000422446 749 ntBASIC17.14■□□□□ 0.33
SNX31Q8N9S9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 AL590326.2-201ENST00000625139 305 ntBASIC17.14■□□□□ 0.33
SNX31Q8N9S9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX31Q8N9S9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNX31Q8N9S9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms