Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 AL590787.1-201ENST00000568856 1315 ntBASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 AC093525.9-201ENST00000624961 1746 ntBASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AP002414.3-201ENST00000589352 1468 ntBASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 SLC25A1P3-201ENST00000395415 828 ntBASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AC092910.1-201ENST00000482027 1129 ntBASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AL356488.2-201ENST00000602755 427 ntBASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AC243591.1-201ENST00000452967 1364 ntBASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TRAM1L1Q8N609 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 AL023806.1-201ENST00000603994 1649 ntBASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 AC005593.1-201ENST00000624894 515 ntBASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 AC141586.5-201ENST00000624546 2050 ntBASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 AC005332.8-201ENST00000622750 2735 ntBASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TRAM1L1Q8N609 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms