Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.73■□□□□ 0.43
SIX5Q8N196 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX5Q8N196 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 AC009336.1-201ENST00000608941 1553 ntBASIC17.73■□□□□ 0.43
SIX5Q8N196 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.73■□□□□ 0.43
SIX5Q8N196 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.72■□□□□ 0.43
SIX5Q8N196 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
SIX5Q8N196 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SIX5Q8N196 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 AC002056.1-201ENST00000395613 760 ntBASIC17.72■□□□□ 0.43
SIX5Q8N196 MIR943-201ENST00000401286 94 ntBASIC17.72■□□□□ 0.43
SIX5Q8N196 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.72■□□□□ 0.43
SIX5Q8N196 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.72■□□□□ 0.43
SIX5Q8N196 RN7SL204P-201ENST00000582831 262 ntBASIC17.72■□□□□ 0.43
SIX5Q8N196 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.72■□□□□ 0.43
SIX5Q8N196 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SIX5Q8N196 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIX5Q8N196 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX5Q8N196 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX5Q8N196 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.71■□□□□ 0.43
SIX5Q8N196 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX5Q8N196 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX5Q8N196 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SIX5Q8N196 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SIX5Q8N196 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SIX5Q8N196 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX5Q8N196 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SIX5Q8N196 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SIX5Q8N196 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.7■□□□□ 0.42
SIX5Q8N196 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SIX5Q8N196 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 TFAMP1-201ENST00000412727 736 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 AL355306.1-201ENST00000415580 579 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.7■□□□□ 0.42
SIX5Q8N196 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.7■□□□□ 0.42
SIX5Q8N196 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.7■□□□□ 0.42
SIX5Q8N196 AL671277.1-201ENST00000429656 993 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 SPDYE11-202ENST00000450699 704 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 KRT8P48-201ENST00000515599 1220 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 SPDYE9P-201ENST00000570642 692 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms