Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 HNRNPDP1-201ENST00000439535 754 ntBASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 AC139887.3-201ENST00000568585 713 ntBASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 AC004817.3-201ENST00000602957 2129 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 IL9RP2-201ENST00000423948 1312 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 AC132938.5-201ENST00000624980 1813 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 LAGE3P1-201ENST00000425356 484 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 SIGLEC30P-201ENST00000455569 941 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 RNA5SP419-201ENST00000515908 135 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 MIR7706-201ENST00000613747 67 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 BX640515.1-201ENST00000617215 977 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 AC073592.4-201ENST00000623827 446 ntBASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM48Q8IWZ4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 AL049840.3-201ENST00000602669 611 ntBASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms