Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.31■■□□□ 1.48
UBR1Q8IWV7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 ACA64.2-201ENST00000459014 129 ntBASIC24.3■■□□□ 1.48
UBR1Q8IWV7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 TP53TG3HP-202ENST00000569755 579 ntBASIC24.3■■□□□ 1.48
UBR1Q8IWV7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 GRAMD4P3-201ENST00000621665 1669 ntBASIC24.3■■□□□ 1.48
UBR1Q8IWV7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 AL080243.2-201ENST00000418783 582 ntBASIC24.3■■□□□ 1.48
UBR1Q8IWV7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 AL138918.1-201ENST00000568306 659 ntBASIC24.3■■□□□ 1.48
UBR1Q8IWV7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 AC091167.2-201ENST00000579581 588 ntBASIC24.3■■□□□ 1.48
UBR1Q8IWV7 AC073389.1-201ENST00000595595 795 ntBASIC24.3■■□□□ 1.48
UBR1Q8IWV7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC24.3■■□□□ 1.48
UBR1Q8IWV7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 AP3S2-216ENST00000617003 1561 ntBASIC24.29■■□□□ 1.48
UBR1Q8IWV7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 LYSMD4-203ENST00000378904 2122 ntBASIC24.29■■□□□ 1.48
UBR1Q8IWV7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 AC018529.1-201ENST00000613063 361 ntBASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms