Protein–RNA interactions for Protein: Q7Z460

CLASP1, CLIP-associating protein 1, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1Q7Z460 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 AC008735.3-201ENST00000596646 500 ntBASIC27.35■■□□□ 1.97
CLASP1Q7Z460 TMEM261P1-201ENST00000604899 340 ntBASIC27.35■■□□□ 1.97
CLASP1Q7Z460 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC27.35■■□□□ 1.97
CLASP1Q7Z460 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 AC133552.6-201ENST00000613406 534 ntBASIC27.34■■□□□ 1.97
CLASP1Q7Z460 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC27.34■■□□□ 1.97
CLASP1Q7Z460 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 AL133215.2-201ENST00000609242 977 ntBASIC27.33■■□□□ 1.97
CLASP1Q7Z460 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CLASP1Q7Z460 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 CD74-212ENST00000524315 584 ntTSL 5 BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 GPR182-203ENST00000622922 591 ntBASIC27.32■■□□□ 1.96
CLASP1Q7Z460 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLASP1Q7Z460 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 SPDYE19P-201ENST00000338590 713 ntBASIC27.31■■□□□ 1.96
CLASP1Q7Z460 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AL512361.1-201ENST00000554200 418 ntBASIC27.31■■□□□ 1.96
CLASP1Q7Z460 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AC073592.3-201ENST00000625118 1834 ntBASIC27.31■■□□□ 1.96
CLASP1Q7Z460 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 HLA-H-201ENST00000383620 1096 ntBASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLASP1Q7Z460 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLASP1Q7Z460 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CLASP1Q7Z460 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC27.3■■□□□ 1.96
CLASP1Q7Z460 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLASP1Q7Z460 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLASP1Q7Z460 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC27.3■■□□□ 1.96
CLASP1Q7Z460 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms