Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 AC006116.8-202ENST00000587620 1550 ntBASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 AC022211.2-201ENST00000585075 2527 ntBASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 AC148477.5-201ENST00000625164 1645 ntBASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD3Q6PCD5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 AC008894.3-201ENST00000624324 3103 ntBASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 KLF4P1-201ENST00000412782 1185 ntBASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 IGHV3-52-201ENST00000519770 353 ntBASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 AC073592.4-201ENST00000623827 446 ntBASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 FAM215A-202ENST00000632077 792 ntBASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD3Q6PCD5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms