Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 AL033527.4-201ENST00000641026 673 ntBASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13DQ5THJ4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 AL596325.1-201ENST00000563991 1082 ntBASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 MIR6799-201ENST00000620297 69 ntBASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 AL158211.3-201ENST00000607385 239 ntBASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13DQ5THJ4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 LYSMD4-203ENST00000378904 2122 ntBASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 MYCLP1-201ENST00000372451 1075 ntBASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 DGCR5-201ENST00000399539 862 ntBASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13DQ5THJ4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
VPS13DQ5THJ4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms