Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 AC046185.3-201ENST00000623228 1824 ntBASIC17.53■□□□□ 0.4
LGSNQ5TDP6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LGSNQ5TDP6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 COX5BP2-201ENST00000392354 334 ntBASIC17.52■□□□□ 0.4
LGSNQ5TDP6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 AL596275.1-201ENST00000423464 877 ntBASIC17.52■□□□□ 0.4
LGSNQ5TDP6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 HLA-F-220ENST00000434407 884 ntBASIC17.52■□□□□ 0.4
LGSNQ5TDP6 AC068472.1-201ENST00000474589 881 ntBASIC17.52■□□□□ 0.4
LGSNQ5TDP6 AP003733.1-201ENST00000491725 852 ntBASIC17.52■□□□□ 0.4
LGSNQ5TDP6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 IGHV3-52-201ENST00000519770 353 ntBASIC17.52■□□□□ 0.4
LGSNQ5TDP6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LGSNQ5TDP6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 AL353692.3-201ENST00000407031 1396 ntBASIC17.52■□□□□ 0.39
LGSNQ5TDP6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.52■□□□□ 0.39
LGSNQ5TDP6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 PCDHB19P-201ENST00000570871 2371 ntBASIC17.51■□□□□ 0.39
LGSNQ5TDP6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 IGHGP-201ENST00000390555 1178 ntBASIC17.51■□□□□ 0.39
LGSNQ5TDP6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 ZNF444P1-201ENST00000559497 298 ntBASIC17.51■□□□□ 0.39
LGSNQ5TDP6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms