Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6AP1LQ52LC2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATP6AP1LQ52LC2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6AP1LQ52LC2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 AK4P3-201ENST00000418260 669 ntBASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 KRT18P57-201ENST00000443599 1254 ntBASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 HYMAI.1-201ENST00000620949 238 ntBASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 AC005915.1-201ENST00000624912 2018 ntBASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6AP1LQ52LC2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 AC007967.3-201ENST00000434308 558 ntBASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 GUSBP12-201ENST00000513727 720 ntBASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 AC109462.3-201ENST00000573934 613 ntBASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 AC105020.1-201ENST00000435356 2205 ntBASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6AP1LQ52LC2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP6AP1LQ52LC2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6AP1LQ52LC2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP6AP1LQ52LC2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP6AP1LQ52LC2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6AP1LQ52LC2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms