Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 AC084018.2-201ENST00000613093 2607 ntBASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FLJ16779-201ENST00000612722 7638 ntBASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 MIR574-201ENST00000385209 96 ntBASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 SAPCD2P3-201ENST00000455031 850 ntBASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 VENTXP7-201ENST00000475503 772 ntBASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRFAM7AQ494W8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 AL355312.1-201ENST00000407115 2176 ntBASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRFAM7AQ494W8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms