Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRICKLE4Q2TBC4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 NCF1C-201ENST00000438382 1427 ntBASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 AC004870.1-201ENST00000315132 882 ntBASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 AC025062.2-201ENST00000605477 670 ntBASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 AL589182.2-201ENST00000619332 1049 ntBASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRICKLE4Q2TBC4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 AL353135.1-201ENST00000606729 504 ntBASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 TP73-AS1-207ENST00000624167 988 ntBASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 AC012313.1-201ENST00000593393 3059 ntBASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRICKLE4Q2TBC4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 LTB4R2-202ENST00000528054 3092 ntBASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms