Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 AC004263.2-201ENST00000617183 678 ntBASIC19.06■□□□□ 0.64
TSR1Q2NL82 AC141257.4-201ENST00000634557 245 ntBASIC19.06■□□□□ 0.64
TSR1Q2NL82 AC136944.6-201ENST00000634818 245 ntBASIC19.06■□□□□ 0.64
TSR1Q2NL82 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 AC060834.1-201ENST00000443027 2032 ntBASIC19.06■□□□□ 0.64
TSR1Q2NL82 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TSR1Q2NL82 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSR1Q2NL82 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 KRT18P22-201ENST00000402024 1347 ntBASIC19.05■□□□□ 0.64
TSR1Q2NL82 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 AC116353.5-201ENST00000638148 1699 ntBASIC19.05■□□□□ 0.64
TSR1Q2NL82 AL391807.1-203ENST00000604392 2365 ntBASIC19.05■□□□□ 0.64
TSR1Q2NL82 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 AL136038.4-201ENST00000603606 1261 ntBASIC19.05■□□□□ 0.64
TSR1Q2NL82 AL139327.4-201ENST00000612362 153 ntBASIC19.05■□□□□ 0.64
TSR1Q2NL82 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.05■□□□□ 0.64
TSR1Q2NL82 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 LINC01568-207ENST00000641790 1380 ntBASIC19.05■□□□□ 0.64
TSR1Q2NL82 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSR1Q2NL82 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 RASA4DP-201ENST00000460726 1199 ntBASIC19.04■□□□□ 0.64
TSR1Q2NL82 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.04■□□□□ 0.64
TSR1Q2NL82 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSR1Q2NL82 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.04■□□□□ 0.64
TSR1Q2NL82 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms