Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 MFF-223ENST00000524634 647 ntTSL 2 BASIC23.05■■□□□ 1.28
COL16A1Q07092 AC073389.1-201ENST00000595595 795 ntBASIC23.05■■□□□ 1.28
COL16A1Q07092 AC133552.6-201ENST00000613406 534 ntBASIC23.05■■□□□ 1.28
COL16A1Q07092 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 AFG3L1P-217ENST00000557444 2447 ntBASIC23.05■■□□□ 1.28
COL16A1Q07092 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL16A1Q07092 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.04■■□□□ 1.28
COL16A1Q07092 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC23.04■■□□□ 1.28
COL16A1Q07092 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.04■■□□□ 1.28
COL16A1Q07092 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC23.04■■□□□ 1.28
COL16A1Q07092 AC008735.3-201ENST00000596646 500 ntBASIC23.04■■□□□ 1.28
COL16A1Q07092 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.04■■□□□ 1.28
COL16A1Q07092 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL16A1Q07092 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
COL16A1Q07092 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.04■■□□□ 1.28
COL16A1Q07092 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL16A1Q07092 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC23.04■■□□□ 1.28
COL16A1Q07092 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC23.04■■□□□ 1.28
COL16A1Q07092 AC087499.6-201ENST00000411576 835 ntBASIC23.04■■□□□ 1.28
COL16A1Q07092 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC23.04■■□□□ 1.28
COL16A1Q07092 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.04■■□□□ 1.28
COL16A1Q07092 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC23.03■■□□□ 1.28
COL16A1Q07092 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.03■■□□□ 1.28
COL16A1Q07092 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC23.03■■□□□ 1.28
COL16A1Q07092 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC23.03■■□□□ 1.28
COL16A1Q07092 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.03■■□□□ 1.28
COL16A1Q07092 AC055876.2-201ENST00000531834 546 ntBASIC23.03■■□□□ 1.28
COL16A1Q07092 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
COL16A1Q07092 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.03■■□□□ 1.28
COL16A1Q07092 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
COL16A1Q07092 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.03■■□□□ 1.28
COL16A1Q07092 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC23.03■■□□□ 1.28
COL16A1Q07092 AL035456.1-201ENST00000456064 1369 ntBASIC23.03■■□□□ 1.28
COL16A1Q07092 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL16A1Q07092 AL353732.1-201ENST00000569618 1459 ntBASIC23.03■■□□□ 1.28
COL16A1Q07092 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL16A1Q07092 AL020996.1-203ENST00000536896 2307 ntBASIC23.02■■□□□ 1.28
COL16A1Q07092 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
COL16A1Q07092 SPDYE19P-201ENST00000338590 713 ntBASIC23.02■■□□□ 1.28
COL16A1Q07092 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COL16A1Q07092 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC23.02■■□□□ 1.28
COL16A1Q07092 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
COL16A1Q07092 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
COL16A1Q07092 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.02■■□□□ 1.28
COL16A1Q07092 AC099548.2-209ENST00000480264 625 ntBASIC23.02■■□□□ 1.28
COL16A1Q07092 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC23.02■■□□□ 1.28
COL16A1Q07092 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC23.02■■□□□ 1.28
COL16A1Q07092 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COL16A1Q07092 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
COL16A1Q07092 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
COL16A1Q07092 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC23.02■■□□□ 1.28
COL16A1Q07092 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
COL16A1Q07092 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL16A1Q07092 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL16A1Q07092 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL16A1Q07092 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.02■■□□□ 1.28
COL16A1Q07092 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.02■■□□□ 1.28
COL16A1Q07092 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL16A1Q07092 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.02■■□□□ 1.28
COL16A1Q07092 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.02■■□□□ 1.28
COL16A1Q07092 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL16A1Q07092 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL16A1Q07092 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC23.01■■□□□ 1.27
COL16A1Q07092 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL16A1Q07092 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.01■■□□□ 1.27
COL16A1Q07092 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC23.01■■□□□ 1.27
COL16A1Q07092 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
COL16A1Q07092 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC23.01■■□□□ 1.27
COL16A1Q07092 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL16A1Q07092 SLC22A20-204ENST00000530038 1673 ntBASIC23.01■■□□□ 1.27
COL16A1Q07092 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC23.01■■□□□ 1.27
COL16A1Q07092 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL16A1Q07092 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL16A1Q07092 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms