Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX6-1P78426 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
NKX6-1P78426 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NKX6-1P78426 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-1P78426 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-1P78426 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX6-1P78426 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 HLA-J-201ENST00000462773 1622 ntBASIC15.32■□□□□ 0.04
NKX6-1P78426 OR6D1P-203ENST00000641209 4860 ntBASIC15.32■□□□□ 0.04
NKX6-1P78426 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-1P78426 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-1P78426 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NKX6-1P78426 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-1P78426 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NKX6-1P78426 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NKX6-1P78426 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-1P78426 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
NKX6-1P78426 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-1P78426 AC007967.3-201ENST00000434308 558 ntBASIC15.32■□□□□ 0.04
NKX6-1P78426 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.32■□□□□ 0.04
NKX6-1P78426 IGHV3-22-201ENST00000520721 359 ntBASIC15.32■□□□□ 0.04
NKX6-1P78426 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.32■□□□□ 0.04
NKX6-1P78426 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 AC011270.2-201ENST00000624293 2550 ntBASIC15.32■□□□□ 0.04
NKX6-1P78426 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NKX6-1P78426 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-1P78426 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-1P78426 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-1P78426 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-1P78426 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 AC100803.2-201ENST00000562459 1963 ntBASIC15.31■□□□□ 0.04
NKX6-1P78426 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-1P78426 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX6-1P78426 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX6-1P78426 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
NKX6-1P78426 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NKX6-1P78426 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 AC092910.1-201ENST00000482027 1129 ntBASIC15.31■□□□□ 0.04
NKX6-1P78426 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-1P78426 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX6-1P78426 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX6-1P78426 AP001160.2-201ENST00000596071 487 ntBASIC15.31■□□□□ 0.04
NKX6-1P78426 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms