Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 BX842568.4-201ENST00000421222 227 ntBASIC17.13■□□□□ 0.33
SRP54P61011 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.13■□□□□ 0.33
SRP54P61011 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SRP54P61011 RNA5SP416-201ENST00000516838 111 ntBASIC17.13■□□□□ 0.33
SRP54P61011 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.13■□□□□ 0.33
SRP54P61011 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP54P61011 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRP54P61011 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP54P61011 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP54P61011 REXO1L11P-201ENST00000620964 1927 ntBASIC17.13■□□□□ 0.33
SRP54P61011 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.13■□□□□ 0.33
SRP54P61011 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.13■□□□□ 0.33
SRP54P61011 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.13■□□□□ 0.33
SRP54P61011 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRP54P61011 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRP54P61011 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SRP54P61011 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SRP54P61011 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.12■□□□□ 0.33
SRP54P61011 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 LINC00982-205ENST00000420957 435 ntBASIC17.12■□□□□ 0.33
SRP54P61011 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.12■□□□□ 0.33
SRP54P61011 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP54P61011 AL354751.1-201ENST00000412768 1863 ntBASIC17.12■□□□□ 0.33
SRP54P61011 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SRP54P61011 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP54P61011 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SRP54P61011 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRP54P61011 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP54P61011 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP54P61011 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP54P61011 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.11■□□□□ 0.33
SRP54P61011 RPS15P9-201ENST00000494093 319 ntBASIC17.11■□□□□ 0.33
SRP54P61011 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.11■□□□□ 0.33
SRP54P61011 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.11■□□□□ 0.33
SRP54P61011 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.11■□□□□ 0.33
SRP54P61011 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP54P61011 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP54P61011 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP54P61011 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SRP54P61011 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SRP54P61011 AC135050.7-201ENST00000624508 2218 ntBASIC17.11■□□□□ 0.33
SRP54P61011 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SRP54P61011 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRP54P61011 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRP54P61011 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SRP54P61011 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.1■□□□□ 0.33
SRP54P61011 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
SRP54P61011 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SRP54P61011 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRP54P61011 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRP54P61011 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP54P61011 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms