Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.11■□□□□ 0.65
PEX3P56589 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.11■□□□□ 0.65
PEX3P56589 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.11■□□□□ 0.65
PEX3P56589 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PEX3P56589 AC004706.3-202ENST00000621574 984 ntBASIC19.11■□□□□ 0.65
PEX3P56589 AC008735.5-201ENST00000623544 497 ntBASIC19.11■□□□□ 0.65
PEX3P56589 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PEX3P56589 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PEX3P56589 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PEX3P56589 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.11■□□□□ 0.65
PEX3P56589 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PEX3P56589 OR6D1P-202ENST00000641007 5290 ntBASIC19.1■□□□□ 0.65
PEX3P56589 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.1■□□□□ 0.65
PEX3P56589 AC016396.2-201ENST00000562575 1417 ntBASIC19.1■□□□□ 0.65
PEX3P56589 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.1■□□□□ 0.65
PEX3P56589 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.1■□□□□ 0.65
PEX3P56589 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.1■□□□□ 0.65
PEX3P56589 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.1■□□□□ 0.65
PEX3P56589 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
PEX3P56589 AC006557.2-201ENST00000592985 1240 ntBASIC19.1■□□□□ 0.65
PEX3P56589 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.1■□□□□ 0.65
PEX3P56589 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.1■□□□□ 0.65
PEX3P56589 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PEX3P56589 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.1■□□□□ 0.65
PEX3P56589 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PEX3P56589 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.1■□□□□ 0.65
PEX3P56589 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PEX3P56589 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.1■□□□□ 0.65
PEX3P56589 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PEX3P56589 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PEX3P56589 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 AC243591.1-201ENST00000452967 1364 ntBASIC19.09■□□□□ 0.65
PEX3P56589 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PEX3P56589 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.09■□□□□ 0.65
PEX3P56589 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PEX3P56589 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.09■□□□□ 0.65
PEX3P56589 AC093909.1-201ENST00000504731 1122 ntBASIC19.09■□□□□ 0.65
PEX3P56589 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.09■□□□□ 0.65
PEX3P56589 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.09■□□□□ 0.65
PEX3P56589 AC105339.3-201ENST00000560043 636 ntBASIC19.09■□□□□ 0.65
PEX3P56589 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 AL353135.1-201ENST00000606729 504 ntBASIC19.09■□□□□ 0.65
PEX3P56589 AL139424.1-201ENST00000607572 797 ntBASIC19.09■□□□□ 0.65
PEX3P56589 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.09■□□□□ 0.65
PEX3P56589 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.09■□□□□ 0.65
PEX3P56589 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
PEX3P56589 AC139713.2-201ENST00000641328 2723 ntBASIC19.09■□□□□ 0.65
PEX3P56589 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PEX3P56589 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PEX3P56589 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
PEX3P56589 AP002414.3-201ENST00000589352 1468 ntBASIC19.09■□□□□ 0.65
PEX3P56589 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PEX3P56589 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PEX3P56589 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PEX3P56589 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PEX3P56589 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PEX3P56589 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PEX3P56589 AC006504.4-201ENST00000592118 1568 ntBASIC19.08■□□□□ 0.65
PEX3P56589 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 KRT18P27-201ENST00000427733 1299 ntBASIC19.08■□□□□ 0.64
PEX3P56589 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.08■□□□□ 0.64
PEX3P56589 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 AC116407.3-201ENST00000623905 1129 ntBASIC19.08■□□□□ 0.64
PEX3P56589 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms