Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
EPHB3P54753 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHB3P54753 ELL2P1-201ENST00000413990 1906 ntBASIC18.07■□□□□ 0.48
EPHB3P54753 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHB3P54753 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHB3P54753 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EPHB3P54753 AC135050.7-201ENST00000624508 2218 ntBASIC18.07■□□□□ 0.48
EPHB3P54753 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
EPHB3P54753 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHB3P54753 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHB3P54753 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.06■□□□□ 0.48
EPHB3P54753 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHB3P54753 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EPHB3P54753 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
EPHB3P54753 AC254562.1-201ENST00000417586 456 ntBASIC18.06■□□□□ 0.48
EPHB3P54753 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.06■□□□□ 0.48
EPHB3P54753 FAM185BP-201ENST00000443595 716 ntBASIC18.06■□□□□ 0.48
EPHB3P54753 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.06■□□□□ 0.48
EPHB3P54753 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHB3P54753 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EPHB3P54753 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
EPHB3P54753 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.06■□□□□ 0.48
EPHB3P54753 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.06■□□□□ 0.48
EPHB3P54753 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHB3P54753 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHB3P54753 AC012317.2-201ENST00000623305 2251 ntBASIC18.06■□□□□ 0.48
EPHB3P54753 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EPHB3P54753 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHB3P54753 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
EPHB3P54753 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EPHB3P54753 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHB3P54753 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
EPHB3P54753 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
EPHB3P54753 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHB3P54753 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHB3P54753 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHB3P54753 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHB3P54753 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHB3P54753 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHB3P54753 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 AL513480.1-201ENST00000451731 511 ntBASIC18.05■□□□□ 0.48
EPHB3P54753 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.05■□□□□ 0.48
EPHB3P54753 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHB3P54753 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.05■□□□□ 0.48
EPHB3P54753 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EPHB3P54753 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 LYSMD4-203ENST00000378904 2122 ntBASIC18.05■□□□□ 0.48
EPHB3P54753 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHB3P54753 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHB3P54753 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
EPHB3P54753 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHB3P54753 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHB3P54753 AC129492.6-201ENST00000611383 1305 ntBASIC18.04■□□□□ 0.48
EPHB3P54753 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
EPHB3P54753 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EPHB3P54753 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB3P54753 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB3P54753 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB3P54753 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB3P54753 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB3P54753 FAM58CP-201ENST00000435741 640 ntBASIC18.04■□□□□ 0.48
EPHB3P54753 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB3P54753 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHB3P54753 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.04■□□□□ 0.48
EPHB3P54753 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB3P54753 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.04■□□□□ 0.48
EPHB3P54753 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB3P54753 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
EPHB3P54753 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHB3P54753 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
EPHB3P54753 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHB3P54753 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB3P54753 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB3P54753 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHB3P54753 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB3P54753 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHB3P54753 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms