Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.77■□□□□ 0.44
ATXN3P54252 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ATXN3P54252 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ATXN3P54252 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 HMGN1P19-201ENST00000436976 333 ntBASIC17.77■□□□□ 0.44
ATXN3P54252 ABCD1P5-201ENST00000445663 754 ntBASIC17.77■□□□□ 0.44
ATXN3P54252 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.77■□□□□ 0.44
ATXN3P54252 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.77■□□□□ 0.44
ATXN3P54252 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.77■□□□□ 0.44
ATXN3P54252 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 SART3-203ENST00000546611 1184 ntBASIC17.77■□□□□ 0.44
ATXN3P54252 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.77■□□□□ 0.44
ATXN3P54252 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.77■□□□□ 0.44
ATXN3P54252 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.77■□□□□ 0.43
ATXN3P54252 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATXN3P54252 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 AC084018.2-201ENST00000613093 2607 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 RPSAP43-201ENST00000402237 625 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.76■□□□□ 0.43
ATXN3P54252 RNA5SP415-201ENST00000517246 115 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 KRT18P41-201ENST00000518924 1277 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.76■□□□□ 0.43
ATXN3P54252 AP001160.2-201ENST00000596071 487 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 AC009154.2-201ENST00000621177 724 ntBASIC17.76■□□□□ 0.43
ATXN3P54252 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATXN3P54252 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATXN3P54252 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ATXN3P54252 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ATXN3P54252 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
ATXN3P54252 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 AC008894.3-201ENST00000624324 3103 ntBASIC17.75■□□□□ 0.43
ATXN3P54252 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ATXN3P54252 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.75■□□□□ 0.43
ATXN3P54252 MTCL1P1-201ENST00000446207 792 ntBASIC17.75■□□□□ 0.43
ATXN3P54252 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.75■□□□□ 0.43
ATXN3P54252 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.75■□□□□ 0.43
ATXN3P54252 AC004967.1-201ENST00000453589 447 ntBASIC17.75■□□□□ 0.43
ATXN3P54252 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.75■□□□□ 0.43
ATXN3P54252 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.75■□□□□ 0.43
ATXN3P54252 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.75■□□□□ 0.43
ATXN3P54252 AC034105.1-201ENST00000563488 319 ntBASIC17.75■□□□□ 0.43
ATXN3P54252 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms