Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC25A1P53007 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC25A1P53007 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SLC25A1P53007 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC25A1P53007 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC25A1P53007 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SLC25A1P53007 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
SLC25A1P53007 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SLC25A1P53007 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SLC25A1P53007 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC25A1P53007 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
SLC25A1P53007 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC25A1P53007 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.43■□□□□ 0.06
SLC25A1P53007 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC25A1P53007 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC25A1P53007 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC25A1P53007 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC25A1P53007 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SLC25A1P53007 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
SLC25A1P53007 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC25A1P53007 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC25A1P53007 AL135999.2-201ENST00000622438 1686 ntBASIC15.42■□□□□ 0.06
SLC25A1P53007 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC25A1P53007 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SLC25A1P53007 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC25A1P53007 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC25A1P53007 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC25A1P53007 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC25A1P53007 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC25A1P53007 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC25A1P53007 VENTXP7-201ENST00000475503 772 ntBASIC15.42■□□□□ 0.06
SLC25A1P53007 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 STK19B-204ENST00000512515 211 ntBASIC15.42■□□□□ 0.06
SLC25A1P53007 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC25A1P53007 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SLC25A1P53007 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC25A1P53007 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.42■□□□□ 0.06
SLC25A1P53007 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC25A1P53007 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC25A1P53007 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC25A1P53007 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC25A1P53007 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
SLC25A1P53007 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SLC25A1P53007 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC25A1P53007 AC003669.1-201ENST00000334569 611 ntBASIC15.41■□□□□ 0.06
SLC25A1P53007 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC25A1P53007 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC25A1P53007 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 AC011467.2-201ENST00000598425 242 ntBASIC15.41■□□□□ 0.06
SLC25A1P53007 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.41■□□□□ 0.06
SLC25A1P53007 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SLC25A1P53007 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SLC25A1P53007 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 PCDHA14-201ENST00000506751 2298 ntBASIC15.41■□□□□ 0.06
SLC25A1P53007 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC25A1P53007 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC25A1P53007 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SLC25A1P53007 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC25A1P53007 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC25A1P53007 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC25A1P53007 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC25A1P53007 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms