Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF140P52738 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZNF140P52738 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
ZNF140P52738 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF140P52738 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF140P52738 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF140P52738 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF140P52738 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
ZNF140P52738 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF140P52738 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF140P52738 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZNF140P52738 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF140P52738 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF140P52738 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF140P52738 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF140P52738 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNF140P52738 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.24■□□□□ 0.35
ZNF140P52738 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF140P52738 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNF140P52738 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF140P52738 AL353135.1-201ENST00000606729 504 ntBASIC17.24■□□□□ 0.35
ZNF140P52738 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZNF140P52738 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
ZNF140P52738 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF140P52738 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF140P52738 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF140P52738 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 AC022211.2-201ENST00000585075 2527 ntBASIC17.23■□□□□ 0.35
ZNF140P52738 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ZNF140P52738 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 NCF1C-201ENST00000438382 1427 ntBASIC17.23■□□□□ 0.35
ZNF140P52738 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
ZNF140P52738 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF140P52738 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 SCARNA2-201ENST00000458748 420 ntBASIC17.23■□□□□ 0.35
ZNF140P52738 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF140P52738 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.23■□□□□ 0.35
ZNF140P52738 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZNF140P52738 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 AC124947.2-201ENST00000547118 1133 ntBASIC17.23■□□□□ 0.35
ZNF140P52738 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF140P52738 AC064862.7-201ENST00000604520 867 ntBASIC17.23■□□□□ 0.35
ZNF140P52738 AC025062.2-201ENST00000605477 670 ntBASIC17.23■□□□□ 0.35
ZNF140P52738 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF140P52738 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 GPR89P-201ENST00000407924 1495 ntBASIC17.23■□□□□ 0.35
ZNF140P52738 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZNF140P52738 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF140P52738 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF140P52738 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF140P52738 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 AL121761.2-201ENST00000598007 1648 ntBASIC17.22■□□□□ 0.35
ZNF140P52738 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZNF140P52738 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF140P52738 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF140P52738 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF140P52738 EMBP1-201ENST00000458200 901 ntBASIC17.22■□□□□ 0.35
ZNF140P52738 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ZNF140P52738 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZNF140P52738 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.22■□□□□ 0.35
ZNF140P52738 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF140P52738 MTDHP4-201ENST00000600287 670 ntBASIC17.22■□□□□ 0.35
ZNF140P52738 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms