Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF144AP50876 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 AL138688.1-201ENST00000624851 1594 ntBASIC16.17■□□□□ 0.18
RNF144AP50876 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RNF144AP50876 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF144AP50876 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF144AP50876 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF144AP50876 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RNF144AP50876 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF144AP50876 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF144AP50876 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF144AP50876 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF144AP50876 COX5BP2-201ENST00000392354 334 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 NUS1P2-201ENST00000417358 873 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF144AP50876 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF144AP50876 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF144AP50876 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF144AP50876 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF144AP50876 BNIP3P18-201ENST00000593976 575 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF144AP50876 AC092329.2-201ENST00000598402 547 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 Z69720.1-201ENST00000601483 472 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 AC099336.1-202ENST00000602961 463 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 AC019129.2-201ENST00000609837 1235 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF144AP50876 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF144AP50876 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RNF144AP50876 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF144AP50876 AP001094.4-201ENST00000579008 2176 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF144AP50876 TP73-AS1-210ENST00000637775 1455 ntBASIC16.16■□□□□ 0.18
RNF144AP50876 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF144AP50876 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF144AP50876 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF144AP50876 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF144AP50876 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF144AP50876 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF144AP50876 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF144AP50876 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF144AP50876 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RNF144AP50876 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF144AP50876 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF144AP50876 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF144AP50876 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF144AP50876 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF144AP50876 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF144AP50876 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF144AP50876 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms