Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBP50607 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBP50607 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBP50607 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBP50607 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBP50607 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBP50607 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.31■□□□□ 0.52
TUBP50607 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBP50607 STK25P1-201ENST00000585406 838 ntBASIC18.31■□□□□ 0.52
TUBP50607 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
TUBP50607 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TUBP50607 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBP50607 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBP50607 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBP50607 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBP50607 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TUBP50607 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBP50607 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TUBP50607 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBP50607 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TUBP50607 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBP50607 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.3■□□□□ 0.52
TUBP50607 AC109462.3-201ENST00000573934 613 ntBASIC18.3■□□□□ 0.52
TUBP50607 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.3■□□□□ 0.52
TUBP50607 AC116407.3-201ENST00000623905 1129 ntBASIC18.3■□□□□ 0.52
TUBP50607 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBP50607 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBP50607 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBP50607 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBP50607 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBP50607 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBP50607 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 AL589182.2-201ENST00000619332 1049 ntBASIC18.29■□□□□ 0.52
TUBP50607 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBP50607 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBP50607 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TUBP50607 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBP50607 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBP50607 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBP50607 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TUBP50607 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TUBP50607 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBP50607 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBP50607 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TUBP50607 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TUBP50607 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms