Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE6BP35913 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDE6BP35913 WIZP1-201ENST00000531444 2299 ntBASIC21.22■□□□□ 0.99
PDE6BP35913 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE6BP35913 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE6BP35913 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE6BP35913 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PDE6BP35913 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PDE6BP35913 AC069120.2-201ENST00000524091 540 ntBASIC21.22■□□□□ 0.99
PDE6BP35913 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE6BP35913 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PDE6BP35913 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.22■□□□□ 0.99
PDE6BP35913 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE6BP35913 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDE6BP35913 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE6BP35913 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.22■□□□□ 0.99
PDE6BP35913 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE6BP35913 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE6BP35913 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PDE6BP35913 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
PDE6BP35913 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.21■□□□□ 0.99
PDE6BP35913 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDE6BP35913 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.21■□□□□ 0.99
PDE6BP35913 AC097493.3-201ENST00000509725 367 ntBASIC21.21■□□□□ 0.99
PDE6BP35913 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.21■□□□□ 0.99
PDE6BP35913 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.21■□□□□ 0.99
PDE6BP35913 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.21■□□□□ 0.99
PDE6BP35913 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.21■□□□□ 0.99
PDE6BP35913 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.21■□□□□ 0.99
PDE6BP35913 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE6BP35913 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 REXO1L11P-201ENST00000620964 1927 ntBASIC21.2■□□□□ 0.98
PDE6BP35913 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PDE6BP35913 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.2■□□□□ 0.98
PDE6BP35913 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.2■□□□□ 0.98
PDE6BP35913 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.2■□□□□ 0.98
PDE6BP35913 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.2■□□□□ 0.98
PDE6BP35913 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.2■□□□□ 0.98
PDE6BP35913 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PDE6BP35913 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE6BP35913 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.2■□□□□ 0.98
PDE6BP35913 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PDE6BP35913 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE6BP35913 AC012569.1-201ENST00000591191 1524 ntBASIC21.19■□□□□ 0.98
PDE6BP35913 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PDE6BP35913 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE6BP35913 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.19■□□□□ 0.98
PDE6BP35913 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PDE6BP35913 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE6BP35913 AC109635.5-201ENST00000533593 962 ntBASIC21.19■□□□□ 0.98
PDE6BP35913 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.19■□□□□ 0.98
PDE6BP35913 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.19■□□□□ 0.98
PDE6BP35913 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.19■□□□□ 0.98
PDE6BP35913 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6BP35913 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDE6BP35913 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.18■□□□□ 0.98
PDE6BP35913 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PDE6BP35913 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDE6BP35913 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.18■□□□□ 0.98
PDE6BP35913 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms