Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HOXA11P31270 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HOXA11P31270 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA11P31270 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXA11P31270 AL138688.1-201ENST00000624851 1594 ntBASIC18.64■□□□□ 0.58
HOXA11P31270 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXA11P31270 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HOXA11P31270 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXA11P31270 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXA11P31270 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA11P31270 REXO1L3P-201ENST00000622202 1288 ntBASIC18.64■□□□□ 0.57
HOXA11P31270 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HOXA11P31270 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXA11P31270 AC016396.2-201ENST00000562575 1417 ntBASIC18.64■□□□□ 0.57
HOXA11P31270 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HOXA11P31270 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HOXA11P31270 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXA11P31270 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA11P31270 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA11P31270 AL133373.2-201ENST00000623187 2828 ntBASIC18.64■□□□□ 0.57
HOXA11P31270 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXA11P31270 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA11P31270 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA11P31270 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA11P31270 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HOXA11P31270 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXA11P31270 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 AL031432.2-201ENST00000566714 459 ntBASIC18.63■□□□□ 0.57
HOXA11P31270 AL928711.1-201ENST00000570165 459 ntBASIC18.63■□□□□ 0.57
HOXA11P31270 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA11P31270 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXA11P31270 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA11P31270 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXA11P31270 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXA11P31270 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXA11P31270 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXA11P31270 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
HOXA11P31270 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA11P31270 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA11P31270 ELL2P1-201ENST00000413990 1906 ntBASIC18.62■□□□□ 0.57
HOXA11P31270 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 AL513480.1-201ENST00000451731 511 ntBASIC18.62■□□□□ 0.57
HOXA11P31270 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXA11P31270 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXA11P31270 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA11P31270 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.62■□□□□ 0.57
HOXA11P31270 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HOXA11P31270 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA11P31270 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms