Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 AC068418.2-201ENST00000577309 3703 ntBASIC17.11■□□□□ 0.33
VARSP26640 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.11■□□□□ 0.33
VARSP26640 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
VARSP26640 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
VARSP26640 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 AL118508.1-201ENST00000613502 2345 ntBASIC17.1■□□□□ 0.33
VARSP26640 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
VARSP26640 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 CROCCP2-202ENST00000412962 2773 ntBASIC17.1■□□□□ 0.33
VARSP26640 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VARSP26640 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VARSP26640 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.1■□□□□ 0.33
VARSP26640 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 AC011840.4-201ENST00000578471 627 ntBASIC17.1■□□□□ 0.33
VARSP26640 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.1■□□□□ 0.33
VARSP26640 AL353801.3-201ENST00000609898 542 ntBASIC17.1■□□□□ 0.33
VARSP26640 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.1■□□□□ 0.33
VARSP26640 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VARSP26640 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.1■□□□□ 0.33
VARSP26640 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.1■□□□□ 0.33
VARSP26640 FLJ38576-201ENST00000623820 2459 ntBASIC17.1■□□□□ 0.33
VARSP26640 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
VARSP26640 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARSP26640 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VARSP26640 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
VARSP26640 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.09■□□□□ 0.33
VARSP26640 AP002383.4-201ENST00000442518 975 ntBASIC17.09■□□□□ 0.33
VARSP26640 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.09■□□□□ 0.33
VARSP26640 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.09■□□□□ 0.33
VARSP26640 AC091304.2-201ENST00000564639 760 ntBASIC17.09■□□□□ 0.33
VARSP26640 MIR3180-1-201ENST00000580374 94 ntBASIC17.09■□□□□ 0.33
VARSP26640 MIR3180-3-201ENST00000584616 94 ntBASIC17.09■□□□□ 0.33
VARSP26640 AP002414.4-201ENST00000589764 1148 ntBASIC17.09■□□□□ 0.33
VARSP26640 AC005336.2-201ENST00000593183 939 ntBASIC17.09■□□□□ 0.33
VARSP26640 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.09■□□□□ 0.33
VARSP26640 KRT18P1-202ENST00000452408 1331 ntBASIC17.09■□□□□ 0.33
VARSP26640 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 AC010460.3-201ENST00000511359 1579 ntBASIC17.09■□□□□ 0.33
VARSP26640 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 HLA-J-201ENST00000462773 1622 ntBASIC17.09■□□□□ 0.33
VARSP26640 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.09■□□□□ 0.33
VARSP26640 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.09■□□□□ 0.33
VARSP26640 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms