Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD53P19397 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.82■□□□□ 0.12
CD53P19397 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD53P19397 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CD53P19397 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD53P19397 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.81■□□□□ 0.12
CD53P19397 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.81■□□□□ 0.12
CD53P19397 HLA-A-201ENST00000376802 1334 ntBASIC15.81■□□□□ 0.12
CD53P19397 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.81■□□□□ 0.12
CD53P19397 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.81■□□□□ 0.12
CD53P19397 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.81■□□□□ 0.12
CD53P19397 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.81■□□□□ 0.12
CD53P19397 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD53P19397 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.81■□□□□ 0.12
CD53P19397 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.81■□□□□ 0.12
CD53P19397 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.81■□□□□ 0.12
CD53P19397 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.81■□□□□ 0.12
CD53P19397 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.81■□□□□ 0.12
CD53P19397 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.81■□□□□ 0.12
CD53P19397 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.81■□□□□ 0.12
CD53P19397 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD53P19397 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CD53P19397 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.8■□□□□ 0.12
CD53P19397 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.8■□□□□ 0.12
CD53P19397 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.8■□□□□ 0.12
CD53P19397 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.8■□□□□ 0.12
CD53P19397 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CD53P19397 AC008687.5-201ENST00000593746 558 ntBASIC15.8■□□□□ 0.12
CD53P19397 AC120114.3-201ENST00000611923 658 ntBASIC15.8■□□□□ 0.12
CD53P19397 BX640515.1-201ENST00000617215 977 ntBASIC15.8■□□□□ 0.12
CD53P19397 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CD53P19397 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.8■□□□□ 0.12
CD53P19397 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.8■□□□□ 0.12
CD53P19397 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.8■□□□□ 0.12
CD53P19397 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD53P19397 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.79■□□□□ 0.12
CD53P19397 AC132938.6-201ENST00000623828 1655 ntBASIC15.79■□□□□ 0.12
CD53P19397 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CD53P19397 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.79■□□□□ 0.12
CD53P19397 AC016396.2-201ENST00000562575 1417 ntBASIC15.79■□□□□ 0.12
CD53P19397 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.79■□□□□ 0.12
CD53P19397 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 AC100803.2-201ENST00000562459 1963 ntBASIC15.79■□□□□ 0.12
CD53P19397 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
CD53P19397 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD53P19397 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.79■□□□□ 0.12
CD53P19397 IGHV3-47-201ENST00000425060 335 ntBASIC15.79■□□□□ 0.12
CD53P19397 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.79■□□□□ 0.12
CD53P19397 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.79■□□□□ 0.12
CD53P19397 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.79■□□□□ 0.12
CD53P19397 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.79■□□□□ 0.12
CD53P19397 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CD53P19397 GPR32P1-201ENST00000601788 811 ntBASIC15.79■□□□□ 0.12
CD53P19397 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD53P19397 NFIC-211ENST00000641145 8399 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms