Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ATF1P18846 FAM8A6P-201ENST00000407496 1135 ntBASIC15.27■□□□□ 0.04
ATF1P18846 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 SPDYE15P-201ENST00000424157 909 ntBASIC15.27■□□□□ 0.04
ATF1P18846 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.27■□□□□ 0.04
ATF1P18846 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 AC112698.1-201ENST00000510299 916 ntBASIC15.27■□□□□ 0.04
ATF1P18846 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATF1P18846 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.27■□□□□ 0.04
ATF1P18846 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.27■□□□□ 0.03
ATF1P18846 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 AC092053.1-201ENST00000605787 1936 ntBASIC15.27■□□□□ 0.03
ATF1P18846 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.27■□□□□ 0.03
ATF1P18846 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATF1P18846 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.26■□□□□ 0.03
ATF1P18846 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.26■□□□□ 0.03
ATF1P18846 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ATF1P18846 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.26■□□□□ 0.03
ATF1P18846 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 STARP1-201ENST00000397973 869 ntBASIC15.26■□□□□ 0.03
ATF1P18846 AC005104.2-201ENST00000427818 678 ntBASIC15.26■□□□□ 0.03
ATF1P18846 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.26■□□□□ 0.03
ATF1P18846 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.26■□□□□ 0.03
ATF1P18846 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.26■□□□□ 0.03
ATF1P18846 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.26■□□□□ 0.03
ATF1P18846 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.26■□□□□ 0.03
ATF1P18846 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
ATF1P18846 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 BX276092.7-203ENST00000637198 1536 ntBASIC15.26■□□□□ 0.03
ATF1P18846 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.26■□□□□ 0.03
ATF1P18846 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
ATF1P18846 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.26■□□□□ 0.03
ATF1P18846 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATF1P18846 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.26■□□□□ 0.03
ATF1P18846 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.25■□□□□ 0.03
ATF1P18846 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.25■□□□□ 0.03
ATF1P18846 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.25■□□□□ 0.03
ATF1P18846 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.25■□□□□ 0.03
ATF1P18846 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.25■□□□□ 0.03
ATF1P18846 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.25■□□□□ 0.03
ATF1P18846 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.25■□□□□ 0.03
ATF1P18846 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
ATF1P18846 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.25■□□□□ 0.03
ATF1P18846 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ATF1P18846 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
ATF1P18846 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.25■□□□□ 0.03
ATF1P18846 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 AC011558.1-201ENST00000623459 338 ntBASIC15.25■□□□□ 0.03
ATF1P18846 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATF1P18846 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms