Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS1P17812 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.46■□□□□ 0.39
CTPS1P17812 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS1P17812 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS1P17812 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CTPS1P17812 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.46■□□□□ 0.39
CTPS1P17812 KRT18P67-201ENST00000432816 1264 ntBASIC17.46■□□□□ 0.39
CTPS1P17812 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.46■□□□□ 0.39
CTPS1P17812 HNRNPDP1-201ENST00000439535 754 ntBASIC17.46■□□□□ 0.39
CTPS1P17812 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS1P17812 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.46■□□□□ 0.39
CTPS1P17812 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS1P17812 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTPS1P17812 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS1P17812 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS1P17812 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS1P17812 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS1P17812 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS1P17812 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS1P17812 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CTPS1P17812 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTPS1P17812 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTPS1P17812 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CTPS1P17812 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS1P17812 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS1P17812 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CTPS1P17812 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTPS1P17812 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.45■□□□□ 0.38
CTPS1P17812 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.45■□□□□ 0.38
CTPS1P17812 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.45■□□□□ 0.38
CTPS1P17812 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 SLC25A6P4-201ENST00000586535 553 ntBASIC17.45■□□□□ 0.38
CTPS1P17812 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.45■□□□□ 0.38
CTPS1P17812 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.45■□□□□ 0.38
CTPS1P17812 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS1P17812 AC139713.2-201ENST00000641328 2723 ntBASIC17.45■□□□□ 0.38
CTPS1P17812 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CTPS1P17812 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTPS1P17812 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS1P17812 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS1P17812 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CTPS1P17812 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.44■□□□□ 0.38
CTPS1P17812 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.44■□□□□ 0.38
CTPS1P17812 PRYP5-201ENST00000451909 266 ntBASIC17.44■□□□□ 0.38
CTPS1P17812 AC018712.1-201ENST00000455767 687 ntBASIC17.44■□□□□ 0.38
CTPS1P17812 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.44■□□□□ 0.38
CTPS1P17812 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.44■□□□□ 0.38
CTPS1P17812 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.44■□□□□ 0.38
CTPS1P17812 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS1P17812 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS1P17812 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
CTPS1P17812 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS1P17812 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS1P17812 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS1P17812 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CTPS1P17812 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms