Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.26■□□□□ 0.03
UBCP0CG48 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.26■□□□□ 0.03
UBCP0CG48 AL390719.2-201ENST00000606993 987 ntBASIC15.26■□□□□ 0.03
UBCP0CG48 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 AL596257.1-201ENST00000641463 2694 ntBASIC15.26■□□□□ 0.03
UBCP0CG48 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
UBCP0CG48 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 LINC02012-201ENST00000608206 1725 ntBASIC15.26■□□□□ 0.03
UBCP0CG48 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
UBCP0CG48 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 HBZP1-201ENST00000354915 429 ntBASIC15.25■□□□□ 0.03
UBCP0CG48 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.25■□□□□ 0.03
UBCP0CG48 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.25■□□□□ 0.03
UBCP0CG48 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.25■□□□□ 0.03
UBCP0CG48 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 IGHV3-52-201ENST00000519770 353 ntBASIC15.25■□□□□ 0.03
UBCP0CG48 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
UBCP0CG48 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.25■□□□□ 0.03
UBCP0CG48 AC005332.3-201ENST00000589904 676 ntBASIC15.25■□□□□ 0.03
UBCP0CG48 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
UBCP0CG48 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UBCP0CG48 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
UBCP0CG48 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
UBCP0CG48 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
UBCP0CG48 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.25■□□□□ 0.03
UBCP0CG48 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBCP0CG48 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UBCP0CG48 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.24■□□□□ 0.03
UBCP0CG48 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 AC093525.9-201ENST00000624961 1746 ntBASIC15.24■□□□□ 0.03
UBCP0CG48 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.24■□□□□ 0.03
UBCP0CG48 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.24■□□□□ 0.03
UBCP0CG48 TERF1P1-201ENST00000311003 1181 ntBASIC15.24■□□□□ 0.03
UBCP0CG48 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
UBCP0CG48 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms