Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HOXC6P09630 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC6P09630 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC6P09630 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC6P09630 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC6P09630 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC6P09630 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC6P09630 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC6P09630 AC005237.2-201ENST00000434368 219 ntBASIC19.48■□□□□ 0.71
HOXC6P09630 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXC6P09630 AC079140.1-201ENST00000508039 487 ntBASIC19.48■□□□□ 0.71
HOXC6P09630 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXC6P09630 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC6P09630 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 ABALON-201ENST00000629058 1903 ntBASIC19.48■□□□□ 0.71
HOXC6P09630 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HOXC6P09630 NEFHP1-201ENST00000412845 2629 ntBASIC19.48■□□□□ 0.71
HOXC6P09630 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HOXC6P09630 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC6P09630 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 FLJ13224-201ENST00000313737 1514 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 AL592309.1-201ENST00000443127 649 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 CNN2P2-201ENST00000443536 909 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 CNN2P3-201ENST00000450201 906 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXC6P09630 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 AC243562.1-201ENST00000560672 389 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXC6P09630 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 AL136317.3-201ENST00000618497 906 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 AKAP8P1-201ENST00000434743 1349 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 REXO1L11P-201ENST00000620964 1927 ntBASIC19.47■□□□□ 0.71
HOXC6P09630 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
HOXC6P09630 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC6P09630 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC6P09630 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HOXC6P09630 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC6P09630 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC6P09630 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXC6P09630 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC6P09630 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HOXC6P09630 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC6P09630 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC6P09630 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXC6P09630 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC6P09630 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC6P09630 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC6P09630 TFAMP1-201ENST00000412727 736 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms