Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CYP3A4P08684 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CYP3A4P08684 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.42■□□□□ 0.7
CYP3A4P08684 SLC25A6P2-201ENST00000497974 877 ntBASIC19.42■□□□□ 0.7
CYP3A4P08684 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CYP3A4P08684 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.42■□□□□ 0.7
CYP3A4P08684 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.42■□□□□ 0.7
CYP3A4P08684 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.42■□□□□ 0.7
CYP3A4P08684 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CYP3A4P08684 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.42■□□□□ 0.7
CYP3A4P08684 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.42■□□□□ 0.7
CYP3A4P08684 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 PCDHB18P-201ENST00000524813 2368 ntBASIC19.42■□□□□ 0.7
CYP3A4P08684 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.42■□□□□ 0.7
CYP3A4P08684 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 LINC02012-201ENST00000608206 1725 ntBASIC19.42■□□□□ 0.7
CYP3A4P08684 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.42■□□□□ 0.7
CYP3A4P08684 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYP3A4P08684 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CYP3A4P08684 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.41■□□□□ 0.7
CYP3A4P08684 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CYP3A4P08684 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
CYP3A4P08684 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 IGLL3P-201ENST00000412472 434 ntBASIC19.41■□□□□ 0.7
CYP3A4P08684 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.41■□□□□ 0.7
CYP3A4P08684 MED15P5-201ENST00000423150 992 ntBASIC19.41■□□□□ 0.7
CYP3A4P08684 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 KRT18P3-201ENST00000451602 1288 ntBASIC19.41■□□□□ 0.7
CYP3A4P08684 PGAM5P1-201ENST00000518923 814 ntBASIC19.41■□□□□ 0.7
CYP3A4P08684 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.41■□□□□ 0.7
CYP3A4P08684 MIR4751-201ENST00000578027 74 ntBASIC19.41■□□□□ 0.7
CYP3A4P08684 AC064836.3-201ENST00000607928 673 ntBASIC19.41■□□□□ 0.7
CYP3A4P08684 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.41■□□□□ 0.7
CYP3A4P08684 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
CYP3A4P08684 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CYP3A4P08684 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CYP3A4P08684 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.4■□□□□ 0.7
CYP3A4P08684 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CYP3A4P08684 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.4■□□□□ 0.7
CYP3A4P08684 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.4■□□□□ 0.7
CYP3A4P08684 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CYP3A4P08684 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CYP3A4P08684 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CYP3A4P08684 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CYP3A4P08684 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.4■□□□□ 0.7
CYP3A4P08684 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.4■□□□□ 0.7
CYP3A4P08684 AC007967.2-201ENST00000432613 625 ntBASIC19.4■□□□□ 0.7
CYP3A4P08684 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.4■□□□□ 0.7
CYP3A4P08684 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 KRT18P2-201ENST00000447938 1258 ntBASIC19.4■□□□□ 0.7
CYP3A4P08684 POLD2P1-201ENST00000511220 997 ntBASIC19.4■□□□□ 0.7
CYP3A4P08684 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CYP3A4P08684 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.4■□□□□ 0.7
CYP3A4P08684 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.4■□□□□ 0.7
CYP3A4P08684 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.4■□□□□ 0.7
CYP3A4P08684 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.4■□□□□ 0.7
CYP3A4P08684 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 AC002310.6-201ENST00000624451 1377 ntBASIC19.4■□□□□ 0.7
CYP3A4P08684 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 FRMD8P1-201ENST00000440433 1524 ntBASIC19.4■□□□□ 0.7
CYP3A4P08684 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CYP3A4P08684 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms