Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
MT-ND1P03886 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-ND1P03886 PCDHB17P-201ENST00000539533 2393 ntBASIC16.42■□□□□ 0.22
MT-ND1P03886 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 LINC01568-207ENST00000641790 1380 ntBASIC16.42■□□□□ 0.22
MT-ND1P03886 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 ECEL1P3-201ENST00000427961 737 ntBASIC16.42■□□□□ 0.22
MT-ND1P03886 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.42■□□□□ 0.22
MT-ND1P03886 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
MT-ND1P03886 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND1P03886 KRT18P22-201ENST00000402024 1347 ntBASIC16.42■□□□□ 0.22
MT-ND1P03886 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND1P03886 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND1P03886 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND1P03886 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MT-ND1P03886 AC078925.2-201ENST00000624013 1973 ntBASIC16.41■□□□□ 0.22
MT-ND1P03886 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 PVRIG2P-201ENST00000435460 978 ntBASIC16.41■□□□□ 0.22
MT-ND1P03886 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-ND1P03886 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
MT-ND1P03886 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-ND1P03886 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MT-ND1P03886 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.41■□□□□ 0.22
MT-ND1P03886 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MT-ND1P03886 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-ND1P03886 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MT-ND1P03886 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND1P03886 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MT-ND1P03886 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-ND1P03886 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND1P03886 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.4■□□□□ 0.22
MT-ND1P03886 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms